Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium uptake protein integral membrane component ktrb | VDA_000526 | Not Available | Negative | 3642528 - 3643895 | 49236.7 |
| potassium uptake protein integral membrane component ktra | VDA_000527 | Not Available | Negative | 3643892 - 3644578 | 25080.7 |
| thiaminase ii | VDA_000528 | Not Available | Negative | 3644969 - 3645628 | 24883.6 |
| hydroxymethylpyrimidine abc transporter substrate-binding component | VDA_000529 | Not Available | Negative | 3645683 - 3646630 | 34729.7 |
| hydroxymethylpyrimidine abc transporter transmembrane component | VDA_000530 | Not Available | Negative | 3646665 - 3647468 | 29588.8 |
| hydroxymethylpyrimidine abc transporter atpase component | VDA_000531 | Not Available | Negative | 3647461 - 3648228 | 28665.8 |
| phosphomethylpyrimidine kinase | VDA_000532 | Not Available | Negative | 3648238 - 3649071 | 29275.1 |
| transcriptional regulator tetr family | VDA_000533 | Not Available | Negative | 3649367 - 3649954 | 21803.1 |
| macrophage infectivity potentiator-related protein | VDA_000534 | Not Available | Positive | 3650458 - 3650736 | 10466.8 |
| iduronate sulfatase | VDA_000535 | Not Available | Positive | 3650933 - 3652552 | 60537.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


