Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system h protein | VDA_000506 | Not Available | Negative | 3616953 - 3617219 | 9400.76 |
| aminomethyltransferase (glycine cleavage system t protein) | VDA_000507 | Not Available | Positive | 3617618 - 3618736 | 40802.7 |
| putative luxz | VDA_000508 | Not Available | Positive | 3619110 - 3619808 | 26854.3 |
| ribose operon repressor | VDA_000509 | Not Available | Negative | 3620140 - 3621144 | 37366.1 |
| ribokinase | VDA_000510 | Not Available | Negative | 3621331 - 3622149 | 28529.3 |
| ribose abc transport system ribose-binding protein rbsb | VDA_000511 | Not Available | Negative | 3622431 - 3623231 | 28080.9 |
| ribose abc transport system permease protein rbsc | VDA_000512 | Not Available | Negative | 3623383 - 3624369 | 34504.1 |
| ribose abc transport system atp-binding protein rbsa | VDA_000513 | Not Available | Negative | 3624366 - 3625871 | 54784.5 |
| ribose abc transport system high affinity permease rbsd | VDA_000514 | Not Available | Negative | 3625931 - 3626167 | 8665.5 |
| dna-binding domain of mode/molybdate-binding domain of mode | VDA_000515 | Not Available | Negative | 3626973 - 3627776 | 28851.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


