Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative diheme cytochrome c-553 | VDA_000486 | Not Available | Negative | 3583869 - 3586073 | 81210.5 |
| cytochrome c oxidase subunit ccoo | VDA_000487 | Not Available | Negative | 3586084 - 3586683 | 22334.9 |
| cytochrome c oxidase subunit ccon | VDA_000488 | Not Available | Negative | 3586685 - 3588097 | 54506.1 |
| chitinase | VDA_000489 | Not Available | Positive | 3588739 - 3590427 | 61982.9 |
| ggdef family protein | VDA_000490 | Not Available | Negative | 3590505 - 3592103 | 61119.7 |
| 6-phospho-beta-glucosidase | VDA_000491 | Not Available | Positive | 3592351 - 3593754 | 53428.3 |
| deoxyribodipyrimidine photolyase single-strand-specific | VDA_000492 | Not Available | Negative | 3593840 - 3595150 | 51522.7 |
| alkyl sulfatase | VDA_000493 | Not Available | Positive | 3596185 - 3598164 | 73292.6 |
| transcriptional regulator lysr family | VDA_000494 | Not Available | Negative | 3598312 - 3599217 | 34906.0 |
| beta-lactamase domain protein | VDA_000495 | Not Available | Negative | 3599325 - 3601280 | 73054.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


