Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase yjjg | VDA_000467 | Not Available | Negative | 3556238 - 3556912 | 25592.8 |
| hypothetical chitinase | VDA_000468 | Not Available | Positive | 3557324 - 3559765 | 88188.1 |
| Trna-gly | Not Available | Not Available | Positive | 3560013 - 3560087 | Not Available |
| msha pilin protein msha | VDA_000469 | Not Available | Positive | 3560290 - 3560853 | 20248.3 |
| hypothetical protein | VDA_000470 | Not Available | Negative | 3561301 - 3562257 | 34604.5 |
| cytosine/purines uracil thiamine allantoin permease family protein | VDA_000471 | Not Available | Negative | 3562257 - 3563654 | 49517.0 |
| adp-ribosylglycohydrolase | VDA_000472 | Not Available | Negative | 3563667 - 3564701 | 36993.0 |
| gntr-family transcriptional regulator | VDA_000473 | Not Available | Positive | 3564669 - 3565589 | 34162.1 |
| glucose transport protein | VDA_000474 | Not Available | Positive | 3566165 - 3567631 | 54140.3 |
| kup system potassium uptake protein | VDA_000475 | Not Available | Positive | 3567888 - 3569750 | 68887.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


