Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | VDA_001361 | Not Available | Positive | 258131 - 258688 | 20767.1 |
| undecaprenyl pyrophosphate synthetase | VDA_001362 | Not Available | Positive | 258769 - 259533 | 28618.4 |
| phosphatidate cytidylyltransferase | VDA_001363 | Not Available | Positive | 259639 - 260487 | 30553.5 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | VDA_001364 | Not Available | Positive | 260549 - 261745 | 42952.2 |
| membrane-associated zinc metalloprotease | VDA_001365 | Not Available | Positive | 261745 - 263097 | 49085.1 |
| outer membrane protein assembly factor yaet precursor | VDA_001366 | Not Available | Positive | 263134 - 265557 | 90154.7 |
| putative outer membrane protein omph | VDA_001367 | Not Available | Positive | 265578 - 266087 | 18868.9 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | VDA_001368 | Not Available | Positive | 266192 - 267220 | 36162.5 |
| (3r)-hydroxymyristoyl-[acyl carrier protein] dehydratase | VDA_001369 | Not Available | Positive | 267392 - 267775 | 14149.2 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | VDA_001370 | Not Available | Positive | 267772 - 268560 | 28406.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


