Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siroheme synthase/precorrin-2 oxidase/sirohydrochlorin ferrochelatase | VDA_000367 | Not Available | Negative | 3362673 - 3363620 | 35990.3 |
| putative outer membrane protein | VDA_000368 | Not Available | Negative | 3363834 - 3364388 | 19322.0 |
| transcriptional regulator lysr family | VDA_000369 | Not Available | Positive | 3364569 - 3365456 | 33961.2 |
| hypothetical protein | VDA_000370 | Not Available | Positive | 3365624 - 3365941 | 12777.1 |
| chitinase | VDA_000371 | Not Available | Negative | 3366042 - 3368237 | 79594.6 |
| putative choline-glycine betaine transporter | VDA_000372 | Not Available | Positive | 3368709 - 3370628 | 70220.0 |
| hypothetical protein | VDA_000373 | Not Available | Positive | 3370762 - 3372273 | 57406.4 |
| n-acyl-l-amino acid amidohydrolase | VDA_000374 | Not Available | Negative | 3372361 - 3373512 | 41770.6 |
| hypothetical protein | VDA_000375 | Not Available | Negative | 3373573 - 3374553 | 35267.9 |
| asp/glu/hydantoin racemase | VDA_000376 | Not Available | Negative | 3374686 - 3375483 | 29060.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


