Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_000358 | Not Available | Positive | 3349159 - 3349935 | 28295.0 |
| thioredoxin 2 | VDA_000359 | Not Available | Negative | 3350022 - 3350456 | 16019.3 |
| hypothetical protein | VDA_000360 | Not Available | Negative | 3350727 - 3350924 | 7457.79 |
| Trna-ser | Not Available | Not Available | Positive | 3351345 - 3351435 | Not Available |
| endoribonuclease l-psp | VDA_000361 | Not Available | Positive | 3351896 - 3353161 | 45222.1 |
| sensory box/ggdef family protein | VDA_000362 | Not Available | Positive | 3353556 - 3355208 | 63772.4 |
| putative alpha-1,2-mannosidase | VDA_000363 | Not Available | Positive | 3355448 - 3357844 | 88994.9 |
| uroporphyrinogen-iii methyltransferase | VDA_000364 | Not Available | Negative | 3357900 - 3358661 | 27605.5 |
| nitrite transporter nirc | VDA_000365 | Not Available | Negative | 3358683 - 3359501 | 29200.1 |
| nitrite reductase | VDA_000366 | Not Available | Negative | 3359944 - 3362508 | 93768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


