Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zn-ribbon-containing, possibly nucleic-acid-binding protein | VDA_001351 | Not Available | Positive | 240910 - 241683 | 29139.8 |
| nitric-oxide reductase quinol-dependent | VDA_001352 | Not Available | Negative | 244450 - 246714 | 84393.9 |
| anaerobic nitric oxide reductase transcription regulator norr | VDA_001353 | Not Available | Positive | 246905 - 248425 | 57124.1 |
| hypothetical protein | VDA_001354 | Not Available | Negative | 248738 - 249778 | 39252.3 |
| trna pseudouridine synthase c | VDA_001355 | Not Available | Positive | 250246 - 251025 | 29907.2 |
| [protein-pii] uridylyltransferase | VDA_001356 | Not Available | Negative | 251713 - 254334 | 101010.0 |
| methionine aminopeptidase | VDA_001357 | Not Available | Negative | 254414 - 255241 | 30549.6 |
| ssu ribosomal protein s2p (sae) | VDA_001358 | Not Available | Positive | 255566 - 256291 | 26647.1 |
| translation elongation factor ts | VDA_001359 | Not Available | Positive | 256405 - 257250 | 29742.8 |
| uridylate kinase | VDA_001360 | Not Available | Positive | 257343 - 258071 | 26086.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


