Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (glcnac)2 abc transporter: substrate-binding protein | VDA_000330 | Not Available | Negative | 3313748 - 3315415 | 63287.6 |
| beta-mannosidase | VDA_000331 | Not Available | Negative | 3315664 - 3318168 | 96441.7 |
| putative arac-type regulatory protein | VDA_000332 | Not Available | Negative | 3318397 - 3319239 | 32649.8 |
| fructose-like phosphotransferase enzyme iib component 2 (pts system fructose-like eiib component 2) | VDA_000333 | Not Available | Negative | 3319547 - 3319861 | 11141.5 |
| pts system fructose-specific iic component | VDA_000334 | Not Available | Negative | 3319896 - 3320900 | 34605.3 |
| Trna-ser | Not Available | Not Available | Positive | 3321357 - 3321447 | Not Available |
| nucleotidyltransferase | VDA_000335 | Not Available | Negative | 3321706 - 3322929 | 46581.9 |
| hypothetical protein | VDA_000336 | Not Available | Negative | 3323489 - 3324628 | 44471.2 |
| hypothetical protein | VDA_000337 | Not Available | Positive | 3325282 - 3325545 | 9675.71 |
| msha pilin protein msha | VDA_000338 | Not Available | Positive | 3325763 - 3326347 | 21372.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


