Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 3274777 - 3274853 | Not Available |
| transcriptional regulator | VDA_000301 | Not Available | Negative | 3274971 - 3275876 | 33834.2 |
| urease accessory protein ureg | VDA_000302 | Not Available | Negative | 3275990 - 3276610 | 22429.1 |
| urease accessory protein uref | VDA_000303 | Not Available | Negative | 3276623 - 3277288 | 24958.3 |
| urease accessory protein uree | VDA_000304 | Not Available | Negative | 3277318 - 3277602 | 10338.2 |
| urease alpha subunit | VDA_000305 | Not Available | Negative | 3277794 - 3279497 | 61083.2 |
| urease gamma subunit | VDA_000306 | Not Available | Negative | 3279824 - 3279997 | 6245.61 |
| urease accessory protein ured | VDA_000307 | Not Available | Negative | 3280151 - 3280999 | 32129.6 |
| nickel abc transporter nickel-binding protein nika2 | VDA_000308 | Not Available | Positive | 3281520 - 3283094 | 58720.8 |
| binding-protein-dependent transport systems inner membrane component | VDA_000309 | Not Available | Positive | 3283085 - 3284047 | 35566.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


