Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase chain d | VDA_000282 | Not Available | Positive | 3249238 - 3250068 | 30393.8 |
| [nife] hydrogenase nickel incorporation-associated protein hypb | VDA_000283 | Not Available | Positive | 3250424 - 3251500 | 40379.4 |
| transporter | VDA_000284 | Not Available | Positive | 3251659 - 3252264 | 21728.0 |
| hypothetical protein | VDA_000285 | Not Available | Negative | 3252360 - 3253220 | 32612.5 |
| upf0061 domain-containing protein | VDA_000286 | Not Available | Negative | 3253302 - 3254777 | 56105.6 |
| beta-lactamase carb-3 precursor (carbenicillinase 3) | VDA_000287 | Not Available | Positive | 3255209 - 3255841 | 23155.7 |
| abc-type fe3+ transport system permease component | VDA_000288 | Not Available | Positive | 3256029 - 3257075 | 36693.8 |
| abc transporter atpase subunit | VDA_000289 | Not Available | Positive | 3257080 - 3257874 | 29925.3 |
| iron(iii) abc transporter solute-binding protein | VDA_000290 | Not Available | Positive | 3257871 - 3258893 | 37905.0 |
| hypothetical protein | VDA_000291 | Not Available | Positive | 3259044 - 3259424 | 14382.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


