Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_001341 | Not Available | Positive | 226843 - 227214 | 13213.7 |
| cysteine desulfurase | VDA_001342 | Not Available | Negative | 228107 - 229327 | 44065.7 |
| glycine cleavage system transcriptional activator gcva | VDA_001343 | Not Available | Positive | 229699 - 230610 | 34204.0 |
| hypothetical protein | VDA_001344 | Not Available | Positive | 230600 - 231298 | 25583.6 |
| putative rna 2'-o-ribose methyltransferase mtfa | VDA_001345 | Not Available | Positive | 231717 - 232805 | 41538.2 |
| putative exodeoxyribonuclease ix | VDA_001346 | Not Available | Negative | 232862 - 233638 | 28590.1 |
| decarboxylase family protein | VDA_001347 | Not Available | Negative | 233710 - 235086 | 51256.7 |
| ggdef domain family protein | VDA_001348 | Not Available | Negative | 235277 - 236827 | 59673.5 |
| hypothetical protein | VDA_001349 | Not Available | Negative | 236977 - 239253 | 87595.9 |
| nadph dependent preq0 reductase | VDA_001350 | Not Available | Negative | 239372 - 240220 | 32506.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


