Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized abc transporter atp-binding protein yrbf | VDA_003523 | Not Available | Positive | 3211446 - 3212258 | 29325.4 |
| uncharacterized abc transporter permease component yrbe | VDA_003524 | Not Available | Positive | 3212287 - 3213069 | 27929.0 |
| uncharacterized abc transporter auxiliary component yrbc | VDA_003525 | Not Available | Positive | 3213584 - 3214219 | 24038.3 |
| protein yrba | VDA_003526 | Not Available | Positive | 3214553 - 3214807 | 9341.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | VDA_003527 | Not Available | Positive | 3214818 - 3216074 | 44147.5 |
| outer membrane stress sensor protease degs | VDA_003528 | Not Available | Negative | 3216180 - 3217295 | 39632.0 |
| outer membrane stress sensor protease degq | VDA_003529 | Not Available | Negative | 3217443 - 3218684 | 43842.0 |
| hypothetical protein | VDA_003530 | Not Available | Negative | 3218924 - 3219133 | 7410.38 |
| hypothetical atpase | VDA_003531 | Not Available | Positive | 3219541 - 3220644 | 42896.8 |
| lsu ribosomal protein l13p (l13ae) | VDA_003532 | Not Available | Positive | 3220913 - 3221341 | 15853.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


