Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msha biogenesis protein mshq | VDA_003503 | Not Available | Positive | 3184046 - 3188230 | 154461.0 |
| rod shape-determining protein mreb | VDA_003504 | Not Available | Positive | 3188590 - 3189633 | 36958.5 |
| rod shape-determining protein mrec | VDA_003505 | Not Available | Positive | 3189675 - 3190637 | 35432.9 |
| septum formation protein maf | VDA_003506 | Not Available | Positive | 3191186 - 3191767 | 21499.6 |
| cytoplasmic axial filament protein cafa and ribonuclease g | VDA_003507 | Not Available | Positive | 3191776 - 3193245 | 55269.4 |
| possible exported protein | VDA_003508 | Not Available | Positive | 3193259 - 3197143 | 143029.0 |
| predicted amidohydrolase | VDA_003509 | Not Available | Positive | 3197171 - 3197992 | 30563.7 |
| tldd protein probably a protease | VDA_003510 | Not Available | Positive | 3198005 - 3199453 | 51126.0 |
| putative alpha helix protein | VDA_003511 | Not Available | Negative | 3199552 - 3200076 | 20684.2 |
| pmba protein | VDA_003512 | Not Available | Positive | 3200188 - 3201531 | 48271.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


