Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 3139928 - 3140003 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3140294 - 3143205 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3143295 - 3143414 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 3143466 - 3143541 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3143549 - 3143668 | Not Available |
| homoserine o-succinyltransferase | VDA_003478 | Not Available | Positive | 3143838 - 3144779 | 36308.1 |
| na(+)/h(+) antiporter | VDA_003479 | Not Available | Negative | 3144909 - 3146189 | 46540.9 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | VDA_003480 | Not Available | Positive | 3146386 - 3150051 | 135214.0 |
| aspartokinase | VDA_003481 | Not Available | Negative | 3150112 - 3151491 | 49551.7 |
| serine--pyruvate aminotransferase/l-alanine:glyoxylate aminotransferase | VDA_003482 | Not Available | Positive | 3152042 - 3153160 | 40606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


