Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s13p (s18e) | VDA_003461 | Not Available | Positive | 3118084 - 3118440 | 13278.4 |
| ssu ribosomal protein s11p (s14e) | VDA_003462 | Not Available | Positive | 3118460 - 3118849 | 13892.8 |
| ssu ribosomal protein s4p (s9e) | VDA_003463 | Not Available | Positive | 3118883 - 3119503 | 23395.3 |
| dna-directed rna polymerase alpha subunit | VDA_003464 | Not Available | Positive | 3119527 - 3120516 | 36341.5 |
| lsu ribosomal protein l17p | VDA_003465 | Not Available | Positive | 3120550 - 3120936 | 14566.7 |
| hypothetical glycosyltransferase | VDA_003466 | Not Available | Positive | 3121028 - 3122002 | 36779.9 |
| transcriptional regulator | VDA_003467 | Not Available | Negative | 3121976 - 3123448 | 56661.2 |
| atpase involved in chromosome partitioning | VDA_003468 | Not Available | Negative | 3123451 - 3124128 | 25881.2 |
| periplasmic protein involved in polysaccharide export | VDA_003469 | Not Available | Negative | 3124128 - 3126806 | 98285.6 |
| outer membrane protein | VDA_003470 | Not Available | Negative | 3126803 - 3127588 | 30353.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


