Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-directed repair dna adenine methylase | VDA_003411 | Not Available | Positive | 3076137 - 3076979 | 32213.2 |
| hypothetical protein | VDA_003412 | Not Available | Negative | 3077084 - 3077203 | 4401.24 |
| ribulose-phosphate 3-epimerase | VDA_003413 | Not Available | Positive | 3077306 - 3077980 | 24789.1 |
| phosphoglycolate phosphatase | VDA_003414 | Not Available | Positive | 3077980 - 3078669 | 25150.3 |
| tryptophanyl-trna synthetase | VDA_003415 | Not Available | Positive | 3078767 - 3079789 | 37653.1 |
| hypothetical extracellular nuclease | VDA_003416 | Not Available | Positive | 3080047 - 3082392 | 86461.0 |
| para-aminobenzoate synthase amidotransferase component | VDA_003417 | Not Available | Positive | 3082492 - 3083076 | 21238.6 |
| bifunctional n-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein | VDA_003418 | Not Available | Positive | 3083421 - 3084641 | 44037.9 |
| arginine n-succinyltransferase | VDA_003419 | Not Available | Positive | 3084746 - 3085765 | 37984.4 |
| succinylglutamic semialdehyde dehydrogenase | VDA_003420 | Not Available | Positive | 3085776 - 3087239 | 52702.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


