Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin family protein/glutaredoxin | VDA_003401 | Not Available | Negative | 3063452 - 3064180 | 26587.6 |
| transcriptional regulator, lysr family | VDA_003402 | Not Available | Positive | 3064340 - 3065239 | 33267.7 |
| multimodular transpeptidase-transglycosylase | VDA_003403 | Not Available | Negative | 3065327 - 3067759 | 89286.9 |
| type iv pilus biogenesis protein pilm | VDA_003404 | Not Available | Positive | 3068051 - 3069049 | 37014.7 |
| type iv pilus biogenesis protein piln | VDA_003405 | Not Available | Positive | 3069046 - 3069687 | 24094.2 |
| type iv pilus biogenesis protein pilo | VDA_003406 | Not Available | Positive | 3069684 - 3070274 | 22670.8 |
| type iv pilus biogenesis protein pilq | VDA_003407 | Not Available | Positive | 3070798 - 3072549 | 63672.2 |
| shikimate kinase i | VDA_003408 | Not Available | Positive | 3072966 - 3073397 | 16368.2 |
| 3-dehydroquinate synthase | VDA_003409 | Not Available | Positive | 3073427 - 3074506 | 38843.0 |
| damx-related protein | VDA_003410 | Not Available | Positive | 3074521 - 3076029 | 55845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


