Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-antigen ligase | VDA_003361 | Not Available | Negative | 3018310 - 3019497 | 44897.0 |
| lipid a biosynthesis (kdo) 2-(lauroyl)-lipid iva acyltransferase | VDA_003362 | Not Available | Negative | 3019506 - 3020456 | 36398.0 |
| transcriptional reguator tetr family | VDA_003363 | Not Available | Positive | 3020628 - 3021269 | 25050.9 |
| putative nlpd-related protein family m37 unassigned peptidase (nlpd protein) | VDA_003364 | Not Available | Negative | 3021334 - 3022521 | 43702.6 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | VDA_003365 | Not Available | Negative | 3022539 - 3024080 | 55799.1 |
| hypothetical protein | VDA_003366 | Not Available | Positive | 3024555 - 3024929 | 13601.4 |
| chaperone protein secb | VDA_003367 | Not Available | Positive | 3025022 - 3025489 | 17163.2 |
| glycerol-3-phosphate dehydrogenase | VDA_003368 | Not Available | Positive | 3026083 - 3026529 | 15843.2 |
| serine acetyltransferase | VDA_003369 | Not Available | Positive | 3026661 - 3027482 | 29323.4 |
| trna (cytosine34-2'-o-)-methyltransferase | VDA_003370 | Not Available | Negative | 3027541 - 3028005 | 17438.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


