Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lipopolysaccharide biosynthesis protein | VDA_003351 | Not Available | Negative | 3007690 - 3008823 | 42123.8 |
| 3-deoxy-d-manno-octulosonic acid kinase | VDA_003352 | Not Available | Positive | 3008813 - 3009517 | 27185.7 |
| 3-deoxy-d-manno-octulosonic-acid transferase | VDA_003353 | Not Available | Negative | 3009514 - 3010785 | 46958.1 |
| hypothetical protein | VDA_003354 | Not Available | Positive | 3010949 - 3012004 | 40529.4 |
| putative lipopolysaccharide biosynthesis glycosyltransferase | VDA_003355 | Not Available | Positive | 3012004 - 3012774 | 29077.8 |
| hypothetical protein | VDA_003356 | Not Available | Negative | 3012811 - 3013776 | 37336.0 |
| capsular polysaccharide biosynthesis protein bcbe | VDA_003357 | Not Available | Negative | 3013773 - 3014501 | 27988.0 |
| capsular polysaccharide biosynthesis protein | VDA_003358 | Not Available | Negative | 3014498 - 3016090 | 60831.2 |
| putative capsular polysaccharide biosynthesis protein | VDA_003359 | Not Available | Negative | 3016482 - 3017561 | 40025.2 |
| putative lex2b protein (lipooligosaccharide 5g8 epitopebiosynthesis-associated protein) | VDA_003360 | Not Available | Negative | 3017564 - 3018313 | 29033.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


