Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 196644 - 198131 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 198254 - 198330 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 198375 - 198450 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 198722 - 201633 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 201772 - 201891 | Not Available |
| hypothetical protein | VDA_001326 | Not Available | Negative | 202117 - 202731 | 22552.5 |
| glutamate decarboxylase | VDA_001327 | Not Available | Negative | 202934 - 204334 | 52792.4 |
| glutaminase | VDA_001328 | Not Available | Negative | 204346 - 205305 | 34475.0 |
| probable glutamate/gamma-aminobutyrate antiporter | VDA_001329 | Not Available | Negative | 205316 - 206842 | 55236.2 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | VDA_001330 | Not Available | Negative | 207389 - 208420 | 36040.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


