Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase biogenesis protein surf1 facilitates heme a insertion | VDA_003321 | Not Available | Positive | 2975306 - 2976028 | 28417.8 |
| hypothetical protein | VDA_003322 | Not Available | Positive | 2976012 - 2976602 | 21966.4 |
| heme a synthase cytochrome oxidase biogenesis protein cox15-ctaa | VDA_003323 | Not Available | Positive | 2976612 - 2977661 | 38663.0 |
| heme o synthase protoheme ix farnesyltransferase cox10-ctab | VDA_003324 | Not Available | Positive | 2977654 - 2978559 | 33282.8 |
| dna-damage-inducible protein f | VDA_003325 | Not Available | Positive | 2978650 - 2980017 | 50069.4 |
| hypothetical protein | VDA_003326 | Not Available | Negative | 2980603 - 2981181 | 20813.6 |
| hypothetical comf-related protein | VDA_003327 | Not Available | Negative | 2981268 - 2982017 | 28681.0 |
| biotin synthesis protein bioh | VDA_003328 | Not Available | Positive | 2982051 - 2982821 | 28009.0 |
| transcription accessory protein | VDA_003329 | Not Available | Negative | 2983535 - 2985865 | 85601.1 |
| two-component system response regulator ompr | VDA_003330 | Not Available | Positive | 2986934 - 2987653 | 27359.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


