Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aerobic glycerol-3-phosphate dehydrogenase | VDA_003311 | Not Available | Positive | 2962395 - 2963969 | 59051.2 |
| chorismate--pyruvate lyase | VDA_003312 | Not Available | Positive | 2964638 - 2965180 | 20367.6 |
| 4-hydroxybenzoate polyprenyltransferase | VDA_003313 | Not Available | Positive | 2965174 - 2966037 | 32021.2 |
| glycerol-3-phosphate acyltransferase | VDA_003314 | Not Available | Negative | 2966130 - 2968580 | 92427.1 |
| sos-response repressor and protease lexa | VDA_003315 | Not Available | Positive | 2968949 - 2969575 | 22879.6 |
| o-methyltransferase-related protein | VDA_003316 | Not Available | Positive | 2969726 - 2970523 | 30491.9 |
| cytochrome c oxidase polypeptide ii | VDA_003317 | Not Available | Positive | 2970766 - 2971911 | 43017.3 |
| cytochrome c oxidase polypeptide i | VDA_003318 | Not Available | Positive | 2971922 - 2973538 | 59819.3 |
| cytochrome oxidase biogenesis protein cox11-ctag copper delivery to cox1 | VDA_003319 | Not Available | Positive | 2973548 - 2974144 | 21602.0 |
| cytochrome c oxidase polypeptide iii | VDA_003320 | Not Available | Positive | 2974154 - 2975029 | 32692.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


