Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_003281 | Not Available | Positive | 2926385 - 2926987 | 22235.8 |
| ubiquinone biosynthesis monooxygenase ubib | VDA_003282 | Not Available | Positive | 2926994 - 2928631 | 63191.6 |
| twin-arginine translocation protein tata | VDA_003283 | Not Available | Positive | 2928706 - 2928966 | 9464.37 |
| twin-arginine translocation protein tatb | VDA_003284 | Not Available | Positive | 2929093 - 2929317 | 8438.8 |
| twin-arginine translocation protein tatc | VDA_003285 | Not Available | Positive | 2929329 - 2930084 | 28176.0 |
| deoxyribonuclease tatd | VDA_003286 | Not Available | Positive | 2930156 - 2930944 | 29606.6 |
| porphobilinogen synthase | VDA_003287 | Not Available | Positive | 2931073 - 2932110 | 38187.9 |
| arginine decarboxylase catabolic | VDA_003288 | Not Available | Negative | 2933413 - 2935692 | 84838.5 |
| putrescine/proton symporter putrescine/ornithine antiporter pote | VDA_003289 | Not Available | Negative | 2935901 - 2937172 | 44912.6 |
| aldehyde dehydrogenase | VDA_003290 | Not Available | Negative | 2937886 - 2939346 | 54526.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


