Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 2896595 - 2896670 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 2896700 - 2896775 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2897012 - 2899924 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2900014 - 2900133 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2900210 - 2900286 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 2900322 - 2900398 | Not Available |
| hth-type transcriptional regulator ilvy | VDA_003262 | Not Available | Negative | 2900513 - 2901394 | 32569.5 |
| ketol-acid reductoisomerase | VDA_003263 | Not Available | Positive | 2901519 - 2903006 | 55021.7 |
| hypothetical protein | VDA_003264 | Not Available | Negative | 2903081 - 2903341 | 10000.0 |
| rnd multidrug efflux transporter | VDA_003265 | Not Available | Negative | 2903482 - 2906601 | 112517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


