Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator of the lytr/algr family | VDA_001316 | Not Available | Negative | 183889 - 184602 | 27243.4 |
| autolysin sensor kinase | VDA_001317 | Not Available | Negative | 184595 - 186301 | 62748.7 |
| 2-keto-3-deoxy-d-arabino-heptulosonate-7- phosphate synthase i alpha | VDA_001318 | Not Available | Positive | 186502 - 187569 | 39086.8 |
| chorismate mutase i/cyclohexadienyl dehydrogenase | VDA_001319 | Not Available | Positive | 187590 - 188720 | 42147.6 |
| chorismate mutase i/prephenate dehydratase | VDA_001320 | Not Available | Negative | 188771 - 189943 | 43826.4 |
| ribosome hibernation protein yfia | VDA_001321 | Not Available | Negative | 190021 - 190380 | 13676.3 |
| probable component of the lipoprotein assembly complex (forms a complex with yaet yfgl and nlpb) | VDA_001322 | Not Available | Negative | 190784 - 191512 | 27889.2 |
| ribosomal large subunit pseudouridine synthase d | VDA_001323 | Not Available | Positive | 191681 - 192655 | 36698.4 |
| hypothetical protein | VDA_001324 | Not Available | Positive | 192658 - 193389 | 26548.5 |
| clpb protein | VDA_001325 | Not Available | Positive | 193557 - 196130 | 95660.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


