Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_003207 | Not Available | Positive | 2817483 - 2818835 | 50124.1 |
| hypothetical protein | VDA_003208 | Not Available | Negative | 2818884 - 2819543 | 24041.7 |
| hypothetical gntr-famly transcriptional regulator | VDA_003209 | Not Available | Negative | 2819709 - 2820383 | 25678.9 |
| hypothetical protein | VDA_003210 | Not Available | Positive | 2820764 - 2820937 | 6395.45 |
| protein yihd | VDA_003211 | Not Available | Positive | 2821113 - 2821379 | 10248.5 |
| type cbb3 cytochrome oxidase biogenesis protein ccog involved in cu oxidation | VDA_003212 | Not Available | Positive | 2821568 - 2822905 | 51349.6 |
| yihe protein required for lps synthesis | VDA_003213 | Not Available | Positive | 2822948 - 2823937 | 38582.6 |
| periplasmic thiol:disulfide interchange protein dsba | VDA_003214 | Not Available | Positive | 2824024 - 2824626 | 22450.1 |
| putative comm-related protein | VDA_003215 | Not Available | Negative | 2824719 - 2825333 | 22648.4 |
| hypothetical protein | VDA_003216 | Not Available | Positive | 2825775 - 2827589 | 69503.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


