Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yrdc family protein | VDA_003197 | Not Available | Negative | 2805051 - 2805608 | 20248.1 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | VDA_003198 | Not Available | Positive | 2805801 - 2806286 | 16898.4 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | VDA_003199 | Not Available | Positive | 2806289 - 2807410 | 40639.7 |
| zn-finger domain-containing protein | VDA_003200 | Not Available | Negative | 2807478 - 2808035 | 20900.1 |
| rossmann fold nucleotide-binding protein smf possibly involved in dna uptake | VDA_003201 | Not Available | Negative | 2808622 - 2809716 | 39166.5 |
| lysm domain-containing protein | VDA_003202 | Not Available | Negative | 2809719 - 2810777 | 39937.1 |
| methionyl-trna formyltransferase | VDA_003203 | Not Available | Positive | 2811591 - 2812535 | 34319.3 |
| ribosomal rna small subunit methyltransferase b | VDA_003204 | Not Available | Positive | 2813025 - 2813951 | 34403.8 |
| trk system potassium uptake protein trka | VDA_003205 | Not Available | Positive | 2814140 - 2815516 | 50219.6 |
| potassium uptake protein trkh | VDA_003206 | Not Available | Positive | 2815523 - 2816968 | 51861.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


