Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_003154 | Not Available | Negative | 2747786 - 2748508 | 27236.7 |
| diaminopimelate epimerase | VDA_003155 | Not Available | Negative | 2748505 - 2749335 | 30289.3 |
| diaminopimelate decarboxylase | VDA_003156 | Not Available | Negative | 2749344 - 2750597 | 45958.8 |
| hypothetical protein | VDA_003157 | Not Available | Negative | 2750637 - 2750753 | 4099.06 |
| frataxin cyay | VDA_003158 | Not Available | Positive | 2750833 - 2751144 | 11909.6 |
| adenylate cyclase | VDA_003159 | Not Available | Negative | 2751218 - 2753839 | 100782.0 |
| porphobilinogen deaminase | VDA_003160 | Not Available | Positive | 2754245 - 2755129 | 32137.8 |
| uroporphyrinogen-iii synthase | VDA_003161 | Not Available | Positive | 2755129 - 2755884 | 27933.6 |
| hemx-like protein | VDA_003162 | Not Available | Positive | 2755889 - 2757169 | 46712.4 |
| hemy-like protein | VDA_003163 | Not Available | Positive | 2757166 - 2758353 | 43684.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


