Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 2683236 - 2684709 | Not Available |
| hypothetical protein | VDA_003105 | Not Available | Positive | 2685528 - 2685650 | 4568.22 |
| glutamate racemase | VDA_003106 | Not Available | Negative | 2685619 - 2686440 | 29838.6 |
| atpase of the pp-loop superfamily | VDA_003107 | Not Available | Negative | 2686498 - 2687172 | 25491.6 |
| outer membrane vitamin b12 receptor btub | VDA_003108 | Not Available | Negative | 2687221 - 2689050 | 67643.4 |
| trna (uracil54-c5-)-methyltransferase | VDA_003109 | Not Available | Positive | 2689437 - 2690543 | 43078.1 |
| atpase of the aaa+ class | VDA_003110 | Not Available | Negative | 2690612 - 2690869 | 9608.01 |
| unsaturated fatty acid biosythesis repressor fabr | VDA_003111 | Not Available | Negative | 2691016 - 2691648 | 23930.7 |
| soluble pyridine nucleotide transhydrogenase | VDA_003112 | Not Available | Positive | 2691957 - 2693372 | 51877.6 |
| 3'(2'),5'-bisphosphate nucleotidase | VDA_003113 | Not Available | Negative | 2693470 - 2694294 | 30339.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


