Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen iii decarboxylase | VDA_003089 | Not Available | Negative | 2651418 - 2652296 | 32355.1 |
| nadh pyrophosphatase | VDA_003090 | Not Available | Negative | 2652656 - 2653447 | 29770.0 |
| dna-directed rna polymerase beta' subunit | VDA_003091 | Not Available | Negative | 2654212 - 2658429 | 155193.0 |
| dna-directed rna polymerase beta subunit | VDA_003092 | Not Available | Negative | 2658529 - 2662554 | 149423.0 |
| lsu ribosomal protein l7/l12 (l23e) | VDA_003093 | Not Available | Negative | 2662780 - 2663145 | 12253.7 |
| lsu ribosomal protein l10p (p0) | VDA_003094 | Not Available | Negative | 2663205 - 2663699 | 17516.1 |
| lsu ribosomal protein l1p (l10ae) | VDA_003095 | Not Available | Negative | 2663923 - 2664627 | 24856.1 |
| lsu ribosomal protein l11p (l12e) | VDA_003096 | Not Available | Negative | 2664632 - 2665060 | 14777.0 |
| transcription antitermination protein nusg | VDA_003097 | Not Available | Negative | 2665186 - 2665698 | 19231.9 |
| preprotein translocase subunit sece | VDA_003098 | Not Available | Negative | 2665743 - 2666126 | 13637.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


