Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltose regulon regulatory protein mali (repressor for malxy) | VDA_003079 | Not Available | Positive | 2640065 - 2641111 | 37866.8 |
| hypothetical protein | VDA_003080 | Not Available | Negative | 2641261 - 2641542 | 10120.8 |
| imp cyclohydrolase/phosphoribosylaminoimidazolecarboxamide formyltransferase | VDA_003081 | Not Available | Positive | 2642368 - 2643966 | 57801.5 |
| phosphoribosylamine--glycine ligase | VDA_003082 | Not Available | Positive | 2644004 - 2645290 | 45744.6 |
| peptidyl-prolyl cis-trans isomerase | VDA_003083 | Not Available | Negative | 2645419 - 2646111 | 25742.9 |
| dna-binding protein hu-alpha | VDA_003084 | Not Available | Negative | 2646157 - 2646429 | 9445.35 |
| hemolysin | VDA_003085 | Not Available | Positive | 2646659 - 2647714 | 39303.9 |
| branched-chain amino acid transport system carrier protein | VDA_003086 | Not Available | Negative | 2647823 - 2649145 | 46269.8 |
| hypothetical protein | VDA_003087 | Not Available | Negative | 2649707 - 2650294 | 22455.0 |
| d-3-phosphoglycerate dehydrogenase | VDA_003088 | Not Available | Positive | 2650356 - 2651267 | 34369.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


