Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit c | VDA_003049 | Not Available | Positive | 2597280 - 2597663 | 14660.6 |
| fumarate reductase subunit d | VDA_003050 | Not Available | Positive | 2597674 - 2598036 | 13309.7 |
| hypothetical protein | VDA_003051 | Not Available | Negative | 2598155 - 2599462 | 50172.9 |
| elongation factor p | VDA_003052 | Not Available | Negative | 2599588 - 2600109 | 19043.6 |
| lysine 2,3-aminomutase | VDA_003053 | Not Available | Positive | 2600188 - 2601210 | 38435.7 |
| putative ribosomal protein s6 modification protein | VDA_003054 | Not Available | Positive | 2601987 - 2602550 | 19740.2 |
| site-specific recombinase xerd | VDA_003055 | Not Available | Positive | 2604419 - 2604904 | 18010.8 |
| transposase orfab subunit b | VDA_003056 | Not Available | Positive | 2605583 - 2606260 | 26240.4 |
| hypothetical protein | VDA_003057 | Not Available | Negative | 2607506 - 2608567 | 41430.1 |
| hypothetical protein | VDA_003058 | Not Available | Positive | 2608740 - 2609261 | 19389.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


