Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap-type uncharacterized transport system fused permease component | VDA_002989 | Not Available | Positive | 2512471 - 2515041 | 93030.4 |
| 3-polyprenyl-4-hydroxybenzoate carboxy-lyase ubix | VDA_002990 | Not Available | Negative | 2515135 - 2515755 | 22602.6 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | VDA_002991 | Not Available | Negative | 2515777 - 2517132 | 49074.7 |
| fructose-1,6-bisphosphatase type i | VDA_002992 | Not Available | Positive | 2517370 - 2518380 | 37332.3 |
| inorganic pyrophosphatase | VDA_002993 | Not Available | Positive | 2518812 - 2519057 | 9201.82 |
| hypothetical phage shock protein e | VDA_002994 | Not Available | Positive | 2519252 - 2519437 | 7009.47 |
| hypothetical protein | VDA_002995 | Not Available | Negative | 2519528 - 2523280 | 134076.0 |
| uncharacterized protein ytfm precursor | VDA_002996 | Not Available | Negative | 2523277 - 2524998 | 63779.9 |
| protein ytfj precursor | VDA_002997 | Not Available | Positive | 2525730 - 2526287 | 20334.6 |
| hypothetical protein | VDA_002998 | Not Available | Positive | 2526394 - 2527218 | 31579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


