Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain-fatty-acid--coa ligase | VDA_002959 | Not Available | Negative | 2476559 - 2477458 | 33838.9 |
| hypothetical protein | VDA_002960 | Not Available | Positive | 2478229 - 2478378 | 5864.74 |
| transcriptional regulator lysr family | VDA_002961 | Not Available | Negative | 2478772 - 2479641 | 32205.6 |
| 2-isopropylmalate synthase | VDA_002962 | Not Available | Positive | 2480574 - 2482115 | 56222.7 |
| 3-isopropylmalate dehydrogenase | VDA_002963 | Not Available | Positive | 2482143 - 2483234 | 39524.2 |
| 3-isopropylmalate dehydratase large subunit | VDA_002964 | Not Available | Positive | 2483268 - 2484692 | 50678.8 |
| 3-isopropylmalate dehydratase small subunit | VDA_002965 | Not Available | Positive | 2484692 - 2485294 | 22616.6 |
| hypothetical protein | VDA_002966 | Not Available | Positive | 2485356 - 2486156 | 30909.7 |
| thiamin abc transporter substrate-binding component | VDA_002967 | Not Available | Positive | 2486408 - 2487397 | 37023.3 |
| thiamin abc transporter transmembrane component | VDA_002968 | Not Available | Positive | 2487470 - 2489065 | 58354.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


