Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative inner membrane protein | VDA_002895 | Not Available | Positive | 2377249 - 2377863 | 21720.4 |
| hypothetical deda family protein | VDA_002896 | Not Available | Negative | 2377947 - 2378552 | 22339.3 |
| tyrosyl-trna synthetase | VDA_002897 | Not Available | Negative | 2378653 - 2379840 | 44348.7 |
| hypothetical membrane protein | VDA_002898 | Not Available | Positive | 2379968 - 2381269 | 48584.1 |
| probable iron binding protein from the hesb_isca_sufa family | VDA_002899 | Not Available | Negative | 2381377 - 2381718 | 12022.1 |
| h(+)/cl(-) exchange transporter clca | VDA_002900 | Not Available | Negative | 2381780 - 2383180 | 50106.6 |
| glutamate-1-semialdehyde aminotransferase | VDA_002901 | Not Available | Positive | 2383541 - 2384833 | 45867.1 |
| predicted permease | VDA_002902 | Not Available | Positive | 2385207 - 2386295 | 40100.1 |
| hypothetical 16s rna g1207 methylase rsmc | VDA_002903 | Not Available | Positive | 2386495 - 2387514 | 37573.8 |
| chitin catabolic cascade sensor histidine kinase chis | VDA_002904 | Not Available | Positive | 2387828 - 2391220 | 127171.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


