Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 2 | VDA_002865 | Not Available | Negative | 2330753 - 2331796 | 38858.1 |
| single-stranded-dna-specific exonuclease recj | VDA_002866 | Not Available | Negative | 2332010 - 2333734 | 62863.8 |
| thiol:disulfide interchange protein dsbc | VDA_002867 | Not Available | Negative | 2333839 - 2334570 | 26387.8 |
| site-specific recombinase xerd | VDA_002868 | Not Available | Negative | 2334744 - 2335640 | 34485.8 |
| flavodoxin 2 | VDA_002869 | Not Available | Positive | 2335814 - 2336338 | 19646.0 |
| branched-chain amino acid transport system carrier protein | VDA_002870 | Not Available | Negative | 2336413 - 2337594 | 41588.9 |
| predicted o-methyltransferase | VDA_002871 | Not Available | Positive | 2338103 - 2338816 | 25694.8 |
| atp-dependent rna helicase srmb | VDA_002872 | Not Available | Positive | 2339235 - 2340359 | 42490.1 |
| hypothetical protein | VDA_002873 | Not Available | Negative | 2340459 - 2341232 | 29132.2 |
| sodium/alanine symporter | VDA_002874 | Not Available | Negative | 2341404 - 2342831 | 51262.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


