Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-dependent phosphate transporter | VDA_002855 | Not Available | Positive | 2316733 - 2317878 | 40194.4 |
| thymidylate synthase | VDA_002856 | Not Available | Negative | 2318044 - 2318895 | 32603.8 |
| hypothetical protein | VDA_002857 | Not Available | Positive | 2319113 - 2320420 | 50172.9 |
| prolipoprotein diacylglyceryl transferase | VDA_002858 | Not Available | Negative | 2320519 - 2321322 | 29898.0 |
| hypothetical protein | VDA_002859 | Not Available | Negative | 2321367 - 2322173 | 27530.9 |
| phosphocarrier protein kinase/phosphorylase nitrogen regulation associated | VDA_002860 | Not Available | Negative | 2322193 - 2324451 | 84110.6 |
| dna mismatch repair endonuclease muth | VDA_002861 | Not Available | Positive | 2325639 - 2326307 | 24632.8 |
| transcriptional regulator lysr family | VDA_002862 | Not Available | Negative | 2326304 - 2327182 | 32187.8 |
| putative sigma-54 dependent transcriptional regulator | VDA_002863 | Not Available | Negative | 2327792 - 2329108 | 49650.1 |
| lysyl-trna synthetase (class ii) | VDA_002864 | Not Available | Negative | 2329218 - 2330720 | 57014.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


