Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl-phosphate synthase large chain | VDA_002845 | Not Available | Negative | 2299613 - 2302837 | 117797.0 |
| carbamoyl-phosphate synthase small chain | VDA_002846 | Not Available | Negative | 2302854 - 2303993 | 40908.4 |
| dihydrodipicolinate reductase | VDA_002847 | Not Available | Negative | 2304538 - 2305344 | 28401.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | VDA_002848 | Not Available | Negative | 2305420 - 2306367 | 34880.5 |
| isoleucyl-trna synthetase | VDA_002849 | Not Available | Negative | 2307424 - 2310216 | 104006.0 |
| riboflavin kinase/fmn adenylyltransferase | VDA_002850 | Not Available | Negative | 2310270 - 2311232 | 35908.6 |
| hypothetical protein | VDA_002851 | Not Available | Negative | 2311314 - 2312873 | 56686.3 |
| ssu ribosomal protein s20p | VDA_002852 | Not Available | Positive | 2313084 - 2313344 | 9677.15 |
| transcriptional activator nhar | VDA_002853 | Not Available | Negative | 2313835 - 2314722 | 34110.3 |
| na(+)/h(+) antiporter nhaa type | VDA_002854 | Not Available | Negative | 2315073 - 2316245 | 40730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


