Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protease | VDA_002827 | Not Available | Positive | 2276689 - 2277567 | 32955.2 |
| lipoprotein nlpi precursor | VDA_002828 | Not Available | Negative | 2277678 - 2278631 | 35905.6 |
| polyribonucleotide nucleotidyltransferase | VDA_002829 | Not Available | Negative | 2278709 - 2280829 | 77086.2 |
| ssu ribosomal protein s15p (s13e) | VDA_002830 | Not Available | Negative | 2281180 - 2281449 | 10240.4 |
| trna pseudouridine synthase b | VDA_002831 | Not Available | Negative | 2281575 - 2282522 | 35035.5 |
| ribosome-binding factor a | VDA_002832 | Not Available | Negative | 2282525 - 2282926 | 15348.4 |
| translation initiation factor 2 | VDA_002833 | Not Available | Negative | 2283028 - 2285832 | 102264.0 |
| transcription termination protein nusa | VDA_002834 | Not Available | Negative | 2285862 - 2287346 | 54760.9 |
| upf0090 domain-containing protein | VDA_002835 | Not Available | Negative | 2287369 - 2287824 | 16656.0 |
| Trna-met | Not Available | Not Available | Positive | 2288005 - 2288081 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


