Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agglutination protein | VDA_002817 | Not Available | Negative | 2253628 - 2255034 | 51755.4 |
| abc-type protease exporter membrane fusion protein (mfp) family component prte/apre | VDA_002818 | Not Available | Negative | 2255060 - 2256442 | 51574.7 |
| abc transporter transmembrane region | VDA_002819 | Not Available | Negative | 2256439 - 2258616 | 80007.5 |
| putative rtx toxin | VDA_002820 | Not Available | Negative | 2258679 - 2267975 | 325071.0 |
| peptide chain release factor 3 | VDA_002821 | Not Available | Positive | 2268356 - 2269918 | 58368.7 |
| ribosomal-protein-s18p-alanine acetyltransferase | VDA_002822 | Not Available | Negative | 2270025 - 2270471 | 17023.3 |
| glycerol dehydrogenase | VDA_002823 | Not Available | Negative | 2270987 - 2272084 | 39237.2 |
| putative lipid carrier protein | VDA_002824 | Not Available | Negative | 2272764 - 2273171 | 15613.3 |
| putative c-di-gmp phosphodiesterase a-related protein | VDA_002825 | Not Available | Positive | 2273481 - 2275505 | 76664.6 |
| putative protease | VDA_002826 | Not Available | Positive | 2275668 - 2276675 | 37326.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


