Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VDA_002778 | Not Available | Negative | 2190252 - 2190461 | 7677.25 |
| tmrna-binding protein smpb | VDA_002779 | Not Available | Positive | 2190880 - 2191362 | 18048.9 |
| Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 2191485 - 2191854 | Not Available |
| phage integrase | VDA_002780 | Not Available | Positive | 2192041 - 2193282 | 47311.3 |
| hypothetical protein | VDA_002781 | Not Available | Negative | 2193436 - 2194884 | 54757.9 |
| protein ea31 | VDA_002782 | Not Available | Negative | 2195566 - 2196420 | 32356.7 |
| hypothetical protein | VDA_002783 | Not Available | Negative | 2196414 - 2197937 | 56228.2 |
| hypothetical protein | VDA_002784 | Not Available | Negative | 2198036 - 2198716 | 26732.2 |
| type i restriction-modification system restriction subunit r | VDA_002785 | Not Available | Negative | 2198716 - 2202702 | 152405.0 |
| type i restriction-modification system specificity subunit s | VDA_002786 | Not Available | Negative | 2202765 - 2204021 | 46728.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


