Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide synthesis enzyme cpsc polysaccharide export | VDA_002768 | Not Available | Negative | 2179838 - 2180401 | 20990.6 |
| capsular polysaccharide synthesis enzyme cpsb | VDA_002769 | Not Available | Negative | 2180403 - 2181788 | 53318.8 |
| chaperone protein dnaj | VDA_002770 | Not Available | Negative | 2182300 - 2183439 | 40982.6 |
| chaperone protein dnak | VDA_002771 | Not Available | Negative | 2183536 - 2185452 | 68850.5 |
| heat shock protein grpe | VDA_002772 | Not Available | Negative | 2185667 - 2186287 | 22920.1 |
| hypothetical protein | VDA_002773 | Not Available | Positive | 2186286 - 2186510 | 8159.31 |
| nad kinase | VDA_002774 | Not Available | Positive | 2186507 - 2187388 | 32224.7 |
| dna repair protein recn | VDA_002775 | Not Available | Positive | 2187581 - 2189248 | 62215.3 |
| lipoprotein smpa a component of the essential yaet outer-membrane protein assembly complex | VDA_002776 | Not Available | Positive | 2189576 - 2189860 | 10914.0 |
| hypothetical protein | VDA_002777 | Not Available | Negative | 2189966 - 2190229 | 10082.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


