Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase chain d | VDA_002748 | Not Available | Negative | 2144121 - 2144969 | 31225.8 |
| formate dehydrogenase n alpha subunit | VDA_002749 | Not Available | Positive | 2145074 - 2148088 | 111560.0 |
| fdxh | VDA_002750 | Not Available | Positive | 2148092 - 2148982 | 32677.9 |
| formate dehydrogenase o gamma subunit | VDA_002751 | Not Available | Positive | 2149114 - 2149611 | 18817.2 |
| formate dehydrogenase formation protein fdhe | VDA_002752 | Not Available | Positive | 2149774 - 2150664 | 33476.4 |
| l-seryl-trna(sec) selenium transferase | VDA_002753 | Not Available | Positive | 2150741 - 2152192 | 53206.2 |
| selenocysteine-specific translation elongation factor | VDA_002754 | Not Available | Positive | 2152189 - 2154108 | 72306.7 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2154176 - 2154266 | Not Available |
| putative transcriptional regulator sorc family protein | VDA_002755 | Not Available | Negative | 2154374 - 2155348 | 35540.6 |
| acyl-coa dehydrogenase | VDA_002756 | Not Available | Negative | 2155620 - 2157311 | 65007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


