Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease sbcc | VDA_002738 | Not Available | Negative | 2129130 - 2132927 | 142556.0 |
| exonuclease sbcd | VDA_002739 | Not Available | Negative | 2132933 - 2134174 | 46553.6 |
| hypothetical protein | VDA_002740 | Not Available | Positive | 2134662 - 2135054 | 14163.8 |
| dna recombination-dependent growth factor c | VDA_002741 | Not Available | Positive | 2135324 - 2136238 | 34587.8 |
| 7-alpha-hydroxysteroid dehydrogenase | VDA_002742 | Not Available | Negative | 2136726 - 2137523 | 28196.7 |
| probable integral membrane protein | VDA_002743 | Not Available | Negative | 2137568 - 2138941 | 50444.2 |
| dna-3-methyladenine glycosylase | VDA_002744 | Not Available | Negative | 2139647 - 2140222 | 22016.5 |
| 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase | VDA_002745 | Not Available | Positive | 2140402 - 2141046 | 22645.8 |
| putative protease | VDA_002746 | Not Available | Positive | 2141218 - 2142594 | 51910.8 |
| penicillin-insensitive murein endopeptidase | VDA_002747 | Not Available | Negative | 2142949 - 2143752 | 29728.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


