Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export membrane protein secd | VDA_002718 | Not Available | Negative | 2101576 - 2103291 | 62135.5 |
| preprotein translocase subunit yajc | VDA_002719 | Not Available | Negative | 2103473 - 2103811 | 12170.1 |
| queuine trna-ribosyltransferase | VDA_002720 | Not Available | Negative | 2103835 - 2104968 | 42933.5 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | VDA_002721 | Not Available | Negative | 2105349 - 2106404 | 39065.4 |
| hypothetical trypsin-like serine protease | VDA_002722 | Not Available | Negative | 2106496 - 2107605 | 40472.0 |
| isocitrate lyase | VDA_002723 | Not Available | Negative | 2108348 - 2109655 | 47940.4 |
| malate synthase | VDA_002724 | Not Available | Negative | 2109736 - 2111340 | 60624.4 |
| putative transcriptional regulator lysr family protein | VDA_002725 | Not Available | Negative | 2111998 - 2112894 | 33094.2 |
| alkyl hydroperoxide reductase subunit c-like protein | VDA_002726 | Not Available | Positive | 2113025 - 2113633 | 22309.4 |
| cytoplasmic copper homeostasis protein cutc | VDA_002727 | Not Available | Positive | 2113890 - 2114627 | 26405.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


