Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin 2fe-2s | VDA_002708 | Not Available | Negative | 2092534 - 2092872 | 12307.5 |
| chaperone protein hsca | VDA_002709 | Not Available | Negative | 2092875 - 2094653 | 63436.7 |
| chaperone protein hscb | VDA_002710 | Not Available | Negative | 2094863 - 2095267 | 15756.7 |
| iron binding protein isca for iron-sulfur cluster assembly | VDA_002711 | Not Available | Negative | 2095454 - 2095666 | 7823.11 |
| iron-sulfur cluster assembly scaffold protein iscu | VDA_002712 | Not Available | Negative | 2095795 - 2096181 | 13687.2 |
| cysteine desulfurase | VDA_002713 | Not Available | Negative | 2096219 - 2097433 | 44906.6 |
| iron-sulfur cluster regulator iscr | VDA_002714 | Not Available | Negative | 2097465 - 2097986 | 18533.0 |
| trna:cm32/um32 methyltransferase | VDA_002715 | Not Available | Negative | 2098097 - 2098828 | 26899.7 |
| myo-inositol-1(or 4)-monophosphatase | VDA_002716 | Not Available | Positive | 2099098 - 2099901 | 28900.6 |
| protein-export membrane protein secf | VDA_002717 | Not Available | Negative | 2100615 - 2101484 | 31098.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


