Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | VDA_002678 | Not Available | Negative | 2052405 - 2052875 | 16333.6 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase/gtp cyclohydrolase ii | VDA_002679 | Not Available | Negative | 2053085 - 2054188 | 39677.5 |
| riboflavin synthase alpha chain | VDA_002680 | Not Available | Negative | 2054216 - 2054872 | 23260.2 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase | VDA_002681 | Not Available | Negative | 2054893 - 2056029 | 40924.6 |
| ribonucleotide reductase transcriptional regulator nrdr | VDA_002682 | Not Available | Negative | 2056049 - 2056498 | 17070.4 |
| serine hydroxymethyltransferase | VDA_002683 | Not Available | Negative | 2056695 - 2057945 | 45151.7 |
| nitrogen regulatory protein p-ii | VDA_002684 | Not Available | Negative | 2058337 - 2058675 | 12520.2 |
| phosphoribosylformylglycinamidine synthase | VDA_002685 | Not Available | Negative | 2059492 - 2062995 | 127264.0 |
| putative transglycosylase slt family | VDA_002686 | Not Available | Positive | 2063785 - 2065281 | 56561.4 |
| pp_01506 | VDA_002687 | Not Available | Negative | 2065830 - 2066045 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


