Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 4-methyl-5(b-hydroxyethyl)-thiazol monophosphate biosynthesis enzyme | VDA_002668 | Not Available | Positive | 2040287 - 2040904 | 21693.2 |
| thiamine biosynthesis protein thii | VDA_002669 | Not Available | Negative | 2041027 - 2042475 | 54405.6 |
| flagellar motor rotation protein motb | VDA_002670 | Not Available | Negative | 2042649 - 2043593 | 34803.3 |
| flagellar motor rotation protein mota | VDA_002671 | Not Available | Negative | 2043603 - 2044364 | 27424.1 |
| exodeoxyribonuclease vii small subunit | VDA_002672 | Not Available | Positive | 2044604 - 2044846 | 8947.44 |
| octaprenyl-diphosphate synthase/dimethylallyltransferase/geranyltranstransferase/ geranylgeranyl pyrophosphate synthetase | VDA_002673 | Not Available | Positive | 2044839 - 2045738 | 32615.0 |
| 1-deoxy-d-xylulose 5-phosphate synthase | VDA_002674 | Not Available | Positive | 2046159 - 2047628 | 53450.9 |
| hypothetical protein | VDA_002675 | Not Available | Negative | 2047747 - 2049834 | 79967.2 |
| thiamine-monophosphate kinase | VDA_002676 | Not Available | Negative | 2050864 - 2051850 | 34936.5 |
| transcription termination protein nusb | VDA_002677 | Not Available | Negative | 2051935 - 2052393 | 17438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


