Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | subsp. damselae CIP 102761 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1496724 bp
Thymine Count
1497166 bp
Guanine Count
1023938 bp
Cytosine Count
1028473 bp
Genome Length
5046328 bp
Protein-coding Genes
3495 genes
Non-Coding Genes
259 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted iron-dependent peroxidase | VDA_002638 | Not Available | Negative | 2001516 - 2002412 | 33404.6 |
| hypothetical protein | VDA_002639 | Not Available | Negative | 2002758 - 2002961 | 7333.74 |
| cytochrome c-type protein napc | VDA_002640 | Not Available | Negative | 2005427 - 2006002 | 21777.1 |
| putative periplasmic nitrate reductase,cytochrome c-type protein | VDA_002641 | Not Available | Negative | 2006017 - 2006136 | 4460.27 |
| periplasmic nitrate reductase precursor | VDA_002642 | Not Available | Negative | 2006604 - 2009066 | 92269.0 |
| nitrate/nitrite sensor protein | VDA_002643 | Not Available | Positive | 2010128 - 2011834 | 64414.8 |
| nitrate/nitrite response regulator protein | VDA_002644 | Not Available | Positive | 2011827 - 2012453 | 22635.3 |
| n-succinyl-l,l-diaminopimelate desuccinylase | VDA_002645 | Not Available | Positive | 2013517 - 2014650 | 40992.7 |
| hypothetical protein | VDA_002646 | Not Available | Positive | 2014820 - 2014936 | 4579.36 |
| gamma-glutamyl phosphate reductase | VDA_002647 | Not Available | Negative | 2014985 - 2016226 | 44540.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


